Stem-loop pal-mir-1249

Accession

MI0032631

Description

Pteropus alecto pal-mir-1249 precursor miRNA

Sequence

AGGAGGGAGGAGAUGGGCCAAGuucccucugccuggaACGCCCUUCCCCCCCUUCUUC
(((((((.((.((.((((...(((((........))))))))).)).)))))))))..

Structure

--       A  A  U    CAA     cuc 
  AGGAGGG GG GA GGGC   Guucc   u
  ||||||| || || ||||   |||||    
  UCUUCCC CC CU CCCG   CAagg   g
CU       -  C  U    ---     ucc 

Annotation confidence Not enough data

Genome context

KB030944.1: 785333-785390 [+]

Mature pal-miR-1249-5p

• Accession: MIMAT0040361
• Description: Pteropus alecto pal-miR-1249-5p mature miRNA
• Sequence: 1 - AGGAGGGAGGAGAUGGGCCAAG - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-1249-3p

• Accession: MIMAT0040362
• Description: Pteropus alecto pal-miR-1249-3p mature miRNA
• Sequence: 38 - ACGCCCUUCCCCCCCUUCUUC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682