Stem-loop pal-mir-10016

Accession

MI0032632

Description

Pteropus alecto pal-mir-10016 precursor miRNA

Sequence

AUGGAUGGUGUUUGGAGCCCCAGGAcugaacaagcucacCUAGGGAGAAGACCCAUCCCCUG
..((((((.((((....(((.(((..(((......)))))).)))...))))))))))....

Structure

--AU      U    GGAG   C   Ac   ac 
    GGAUGG GUUU    CCC AGG  uga  a
    |||||| ||||    ||| |||  |||   
    CCUACC CAGA    GGG UCc  acu  a
GUCC      -    -AGA   A   --   cg 

Annotation confidence Not enough data

Genome context

KB030550.1: 1115116-1115177 [+]

Mature pal-miR-10016-5p

• Accession: MIMAT0040363
• Description: Pteropus alecto pal-miR-10016-5p mature miRNA
• Sequence: 1 - AUGGAUGGUGUUUGGAGCCCCAGGA - 25
• Evidence: experimental ; Illumina [1]

Mature pal-miR-10016-3p

• Accession: MIMAT0040364
• Description: Pteropus alecto pal-miR-10016-3p mature miRNA
• Sequence: 40 - CUAGGGAGAAGACCCAUCCCCUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682