Stem-loop pal-mir-656

Accession

MI0032634

Description

Pteropus alecto pal-mir-656 precursor miRNA

Sequence

AGGUUGCCUGUGAGGUGUUCAcuuucuauaugaugAAUAUUAUACAGUCAACCUCU
((((((.(((((.((((((((...((.....)))))))))).))))).))))))..

Structure

--      C     A        cuu  u 
  AGGUUG CUGUG GGUGUUCA   uc a
  |||||| ||||| ||||||||   || u
  UCCAAC GACAU UUAUAAgu   ag a
UC      U     A        ---  u 

Annotation confidence Not enough data

Genome context

KB031153.1: 22109090-22109145 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from pal-mir-656

Mature pal-miR-656-5p

• Accession: MIMAT0040367
• Description: Pteropus alecto pal-miR-656-5p mature miRNA
• Sequence: 1 - AGGUUGCCUGUGAGGUGUUCA - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-656-3p

• Accession: MIMAT0040368
• Description: Pteropus alecto pal-miR-656-3p mature miRNA
• Sequence: 36 - AAUAUUAUACAGUCAACCUCU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682