Stem-loop pal-mir-378c

Accession

MI0032635

Description

Pteropus alecto pal-mir-378c precursor miRNA

Sequence

ACUGGACUUGGAGGCAGAAAgggagccagcugacugagagaUCUGACCUUCAGCAGAGG
.(((...(((((((((((.......((((....))).)...)))).))))))))))...

Structure

--A   GAC       -    AAgggag -   c 
   CUG   UUGGAGG CAGA       c cag u
   |||   ||||||| ||||       | |||  
   GAC   GACUUCC GUCU       g guc g
GGA   ---       A    ----aga a   a 

Annotation confidence Not enough data

Genome context

KB030983.1: 572444-572502 [+]

Mature pal-miR-378c-5p

• Accession: MIMAT0040369
• Description: Pteropus alecto pal-miR-378c-5p mature miRNA
• Sequence: 1 - ACUGGACUUGGAGGCAGAAA - 20
• Evidence: experimental ; Illumina [1]

Mature pal-miR-378c-3p

• Accession: MIMAT0040370
• Description: Pteropus alecto pal-miR-378c-3p mature miRNA
• Sequence: 42 - UCUGACCUUCAGCAGAGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682