Stem-loop pal-mir-3059

Accession

MI0032637

Description

Pteropus alecto pal-mir-3059 precursor miRNA

Sequence

UUUCCUCUCUGCCCCAUAGGGUguagcucuaacuacccUCUAGGGAAGAGAAGGUUGGG
...(((((((..(((.(((((.((((......)))).)))))))).)))).))).....

Structure

--UUU   -    GC   A     U    cu 
     CCU CUCU  CCC UAGGG guag  c
     ||| ||||  ||| ||||| ||||   
     GGA GAGA  GGG AUCUc cauc  u
GGGUU   A    -A   -     c    aa 

Annotation confidence Not enough data

Genome context

KB031122.1: 19891402-19891460 [-]

Mature pal-miR-3059-5p

• Accession: MIMAT0040373
• Description: Pteropus alecto pal-miR-3059-5p mature miRNA
• Sequence: 1 - UUUCCUCUCUGCCCCAUAGGGU - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-3059-3p

• Accession: MIMAT0040374
• Description: Pteropus alecto pal-miR-3059-3p mature miRNA
• Sequence: 39 - UCUAGGGAAGAGAAGGUUGGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682