Stem-loop pal-mir-487a

Accession

MI0032638

Description

Pteropus alecto pal-mir-487a precursor miRNA

Sequence

GUGGUUAUCCCUGCUGUGUUCGcuguauuuaugacgAAUCAUACAGGGACAUCCAGUU
.(((...((((((.(((((((((.........).)))).))))))))))...)))...

Structure

--G   UUA      C    -    - ugu 
   UGG   UCCCUG UGUG UUCG c   a
   |||   |||||| |||| |||| |   u
   ACC   AGGGAC AUAC AAgc g   u
UUG   UAC      -    U    a uau 

Annotation confidence Not enough data

Genome context

KB031153.1: 22094380-22094437 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from pal-mir-487a

Mature pal-miR-487a-5p

• Accession: MIMAT0040375
• Description: Pteropus alecto pal-miR-487a-5p mature miRNA
• Sequence: 1 - GUGGUUAUCCCUGCUGUGUUCG - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-487a-3p

• Accession: MIMAT0040376
• Description: Pteropus alecto pal-miR-487a-3p mature miRNA
• Sequence: 37 - AAUCAUACAGGGACAUCCAGUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682