Stem-loop pal-mir-1306

Accession

MI0032641

Description

Pteropus alecto pal-mir-1306 precursor miRNA

Literature search

1 open access papers mention pal-mir-1306
(1 sentences)

Sequence

GCGCUGCCCCAUGAACAGUCUCCaccaccuccccugcaaacguccagugaugcagagguaauggACGUUGGCUCUGGUGGUGAUG
......................(((((((......((.((((((((...((......))..)))))))).))...)))))))...

Structure

GCGCUGCCCCAUGAACAGUCUC       uccccu  a        gug  gc 
                      Caccacc      gc aacgucca   au  a
                      |||||||      || ||||||||   ||   
                      GUGGUGG      CG UUGCAggu   ug  g
-------------------GUA       ---UCU  G        -aa  ga 

Annotation confidence Not enough data

Genome context

KB030791.1: 4872165-4872249 [-]

Mature pal-miR-1306-5p

• Accession: MIMAT0040381
• Description: Pteropus alecto pal-miR-1306-5p mature miRNA
• Sequence: 1 - GCGCUGCCCCAUGAACAGUCUCC - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-1306-3p

• Accession: MIMAT0040382
• Description: Pteropus alecto pal-miR-1306-3p mature miRNA
• Sequence: 65 - ACGUUGGCUCUGGUGGUGAUG - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682