Stem-loop pal-mir-362

Accession

MI0032645

Description

Pteropus alecto pal-mir-362 precursor miRNA

Sequence

AAAUCCUUGGAACCUAGGUGUGAGUGcuguuuuagugcAACACACCUAUUCAAGGAUUCAA
.((((((((((...((((((((.((((((...))))))..))))))))))))))))))...

Structure

--A          ACC        -A      u 
   AAUCCUUGGA   UAGGUGUG  GUGcug  
   ||||||||||   ||||||||  |||||| u
   UUAGGAACUU   AUCCACAC  cgugau  
AAC          ---        AA      u 

Annotation confidence Not enough data

Genome context

KB030674.1: 316356-316416 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from pal-mir-362

Mature pal-miR-362-5p

• Accession: MIMAT0040388
• Description: Pteropus alecto pal-miR-362-5p mature miRNA
• Sequence: 1 - AAAUCCUUGGAACCUAGGUGUGAGUG - 26
• Evidence: experimental ; Illumina [1]

Mature pal-miR-362-3p

• Accession: MIMAT0040389
• Description: Pteropus alecto pal-miR-362-3p mature miRNA
• Sequence: 39 - AACACACCUAUUCAAGGAUUCAA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682