Stem-loop pal-mir-339b

Accession

MI0032648

Description

Pteropus alecto pal-mir-339b precursor miRNA

Sequence

UCCCUGUCCUCCAGGAGCUuccuuucuagUGGGGGAGACAGGCAAA
..((((((((((((((...))))........)))).))))))....

Structure

--UC      -    --------    G 
    CCUGUC CUCC        AGGA  
    |||||| ||||        |||| C
    GGACAG GGGG        uccu  
AAAC      A    GUgaucuu    U 

Annotation confidence Not enough data

Genome context

KB030572.1: 12818281-12818326 [+]

Mature pal-miR-339b-5p

• Accession: MIMAT0040392
• Description: Pteropus alecto pal-miR-339b-5p mature miRNA
• Sequence: 1 - UCCCUGUCCUCCAGGAGCU - 19
• Evidence: experimental ; Illumina [1]

Mature pal-miR-339b-3p

• Accession: MIMAT0040393
• Description: Pteropus alecto pal-miR-339b-3p mature miRNA
• Sequence: 30 - UGGGGGAGACAGGCAAA - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682