Stem-loop pal-mir-422c

Accession

MI0032653

Description

Pteropus alecto pal-mir-422c precursor miRNA

Sequence

CUAGAAUUCUUUCCAGUGAggaugaagcuacacgcuacagaagaaugagcACUGGACUUGGAGUCAGGAA
((.((.((((.(((((((....((.(((.....))).))..........)))))))...))))))))...

Structure

---  A  A    --U       ------Agga  a   u 
   CU GA UUCU   UCCAGUG          ug agc a
   || || ||||   |||||||          || ||| c
   GA CU GAGG   AGGUCAc          ac ucg a
AAG  -  -    UUC       gaguaagaag  a   c 

Annotation confidence Not enough data

Genome context

KB031038.1: 285852-285921 [+]

Mature pal-miR-422c-5p

• Accession: MIMAT0040402
• Description: Pteropus alecto pal-miR-422c-5p mature miRNA
• Sequence: 1 - CUAGAAUUCUUUCCAGUGA - 19
• Evidence: experimental ; Illumina [1]

Mature pal-miR-422c-3p

• Accession: MIMAT0040403
• Description: Pteropus alecto pal-miR-422c-3p mature miRNA
• Sequence: 51 - ACUGGACUUGGAGUCAGGAA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682