Stem-loop pal-mir-484

Accession

MI0032659

Description

Pteropus alecto pal-mir-484 precursor miRNA

Sequence

UCAGGCUCAGUCCCCUCCCGAuaaaccccuaaauaggggacuucccaGGGGGGCGACCCUAGCUUUUGG
..(((((..(((((((((.((....(((((....)))))...))...)))))).)))...)))))....

Structure

--UC     -CA   -      --C  uaaa     a 
    AGGCU   GUC CCCUCC   GA    ccccu a
    |||||   ||| ||||||   ||    |||||  
    UUCGA   CAG GGGGGG   cu    gggga a
GGUU     UCC   C      acc  -uca     u 

Annotation confidence Not enough data

Genome context

KB030624.1: 4459505-4459573 [+]

Mature pal-miR-484-5p

• Accession: MIMAT0040414
• Description: Pteropus alecto pal-miR-484-5p mature miRNA
• Sequence: 1 - UCAGGCUCAGUCCCCUCCCGA - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-484-3p

• Accession: MIMAT0040415
• Description: Pteropus alecto pal-miR-484-3p mature miRNA
• Sequence: 48 - GGGGGGCGACCCUAGCUUUUGG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682