Stem-loop pal-mir-668

Accession

MI0032660

Description

Pteropus alecto pal-mir-668 precursor miRNA

Sequence

GUAAGUGCGUCUCGGGUGAGCAUGCgauuaaagugguaguAUGUCACUCGGCCCACUACCC
...((((.((..(((((((.(((((.((((...)))).)))))))))))))).))))....

Structure

-GUA    C  CU       G     g    a 
    AGUG GU  CGGGUGA CAUGC auua  
    |||| ||  ||||||| ||||| |||| a
    UCAC CG  GCUCACU GUAug uggu  
CCCA    C  --       -     a    g 

Annotation confidence Not enough data

Genome context

KB031153.1: 22097745-22097805 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from pal-mir-668

Mature pal-miR-668-5p

• Accession: MIMAT0040416
• Description: Pteropus alecto pal-miR-668-5p mature miRNA
• Sequence: 1 - GUAAGUGCGUCUCGGGUGAGCAUGC - 25
• Evidence: experimental ; Illumina [1]

Mature pal-miR-668-3p

• Accession: MIMAT0040417
• Description: Pteropus alecto pal-miR-668-3p mature miRNA
• Sequence: 41 - AUGUCACUCGGCCCACUACCC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682