miRBase entry: bta-mir-10180

Stem-loop bta-mir-10180


Accession
MI0032939
Description
Bos taurus bta-mir-10180 precursor miRNA


Sequence

1792 reads, 2.0 reads per million, 176 experiments
cgggggcguggagccugcagacggugGCCCAGCCUGCUCUUCUGUCCUGggcuacuugcacuagGAGGAGGGGCGCGCUGUGCUCUuguuuuca
.(.((((.....)))).)((((((.(((.((((.(((((((((.((((((((.....)).))))))))))))))).)))).))).))))))...

Structure
cgggggcguggagccugc      u   C    C         G      -  u 
                  agacgg gGC CAGC UGCUCUUCU UCCUGg gc a
                  |||||| ||| |||| ||||||||| |||||| || c
                  uuuguU UCG GUCG GCGGGGAGG AGgauc cg u
---------------acu      C   U    C         -      a  u 


Annotation confidence Medium
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Genome context
16: 80025558-80025651 [+]

Database links

Mature bta-miR-10180-5p

Accession MIMAT0051085
Description Bos taurus bta-miR-10180-5p mature miRNA
Sequence 27 - GCCCAGCCUGCUCUUCUGUCCUG - 49
Evidence experimental
Illumina [1]

Mature bta-miR-10180-3p

Accession MIMAT0040938
Description Bos taurus bta-miR-10180-3p mature miRNA
Sequence 65 - GAGGAGGGGCGCGCUGUGCUCU - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25458694
    Regulating life or death: potential role of microRNA in rescue of the corpus luteum
    "Maalouf SW, Liu WS, Albert I, Pate JL"
    "Mol Cell Endocrinol (2014) 398:78-88