Stem-loop gma-MIR10189

Accession

MI0032954

Description

Glycine max gma-MIR10189 precursor miRNA

Sequence

aacaaauuguuguugcgugguucuguugaauuuuuuaugcaaauucaucauugggugaauauucucuagacgcuauuggaacacguauuuggAAGAACACUAGAACCAUCUCCaaaaucuggc
..((.(((.(((..(.(((((((((.((..((((..((((..(((((((....)))))))....((((........))))....))))..))))...)).))))))))))..)))))).))..

Structure

aa  a   g   uu c         u  -aa    uu    ----------------------aa       a 
  ca auu uug  g gugguucug ug   uuuu  augc                        auucauc u
  || ||| |||  | ||||||||| ||   ||||  ||||                        |||||||  
  gu uaa aaC  C UACCAAGAU AC   AAgg  uaug                        uaagugg u
cg  c   -   CU -         C  AAG    uu    cacaagguuaucgcagaucucuua       g 

Annotation confidence Not enough data

Genome context

chr10: 42439209-42439331 [+]

Mature gma-miR10189

• Accession: MIMAT0040954
• Description: Glycine max gma-miR10189 mature miRNA
• Sequence: 93 - AAGAACACUAGAACCAUCUCC - 113
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25465409
   An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
   "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
   "Plant Cell (2014) 26:4584-4601