miRBase entry: gma-MIR10191

Stem-loop gma-MIR10191


Accession
MI0032956
Description
Glycine max gma-MIR10191 precursor miRNA


Sequence

587 reads, 79.0 reads per million, 92 experiments
cugcgucacaGGCGACUGCGGCUCCUCCGCCGuggaaugcaacggcgcaggagCCGCCCCGCCGGCCACGCUc
..((((....((((...(((((((((.((((((........)))))).)))))))))..))))....))))..

Structure
cu    caca    ACU         C      gga 
  gcgu    GGCG   GCGGCUCCU CGCCGu   a
  ||||    ||||   ||||||||| ||||||    
  CGCA    CCGC   CGCCgagga gcggca   u
cU    CCGG    -CC         c      acg 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
chr11: 5846467-5846539 [+]

Database links

Mature gma-miR10191-5p

Accession MIMAT0040956
Description Glycine max gma-miR10191-5p mature miRNA
Sequence 11 - GGCGACUGCGGCUCCUCCGCCG - 32
Evidence experimental
Illumina [1]

Mature gma-miR10191-3p

Accession MIMAT0054474
Description Glycine max gma-miR10191-3p mature miRNA
Sequence 54 - CCGCCCCGCCGGCCACGCU - 72
Evidence experimental
unknown

References

  1. PubMed ID: 25465409
    An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
    "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
    "Plant Cell (2014) 26:4584-4601