Stem-loop gma-MIR10194

Accession

MI0032961

Description

Glycine max gma-MIR10194 precursor miRNA

Sequence

uguuggcacaUGUUGAAGGUGUGUAUGACAAGuaucaugucauuuaagucuuugacacguuccacaaacaaaggugucaauguuucuugggaagcacugacaucuuugugaaacguguuggcgugucagacacuuaucagacacgacacuugucaugcacgccuucgacacguguuggac
..(((((((.(((((((((((((((((((((((.((.((((...(((((.(((((((((((.(((..((((((((((((.((((((....)))))).)))))))))))).....)))..))))))))))).)))))...)))).)).))))))))))))))))))))))).)))))))..

Structure

ug       a                       a  a    auu     c           -c   ---aa            a      u 
  uuggcac UGUUGAAGGUGUGUAUGACAAGu uc uguc   uaagu uuugacacguu  cac     acaaagguguca uguuuc u
  ||||||| ||||||||||||||||||||||| || ||||   ||||| |||||||||||  |||     |||||||||||| ||||||  
  gguugug acagcuuccgcacguacuguuca ag acag   auuca agacugugcgg  gug     uguuucuacagu acgaag g
ca       c                       c  c    acu     c           uu   caaag            c      g 

Annotation confidence Not enough data

Genome context

chr17: 13116829-13117008 [+]

Mature gma-miR10194

• Accession: MIMAT0040961
• Description: Glycine max gma-miR10194 mature miRNA
• Sequence: 11 - UGUUGAAGGUGUGUAUGACAAG - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25465409
   An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
   "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
   "Plant Cell (2014) 26:4584-4601