Stem-loop gma-MIR10195

Accession

MI0032962

Description

Glycine max gma-MIR10195 precursor miRNA

Sequence

auaguuaucuUAUGAUUUUGUGGAUCAAAGGAggucauucgccaaucuuuauccuauggcuaaagaauuagaguuauccuauggcagcaguggggguaacucuaauuccucaaccauaggauaaagauuggagaauggccuccuuugauacacaugaucauauggaguuggcaua
...((((((((((((((.((((..((((((((((((((((.((((((((((((((((((.....((((((((((((((((.((....))...)))))))))))))))).....)))))))))))))))))).))))))))))))))))..)))).))))))).)))..))))...

Structure

aua    --   -       U    GA                g                  cuaaa                --a  g 
   guua  ucu UAUGAUU UGUG  UCAAAGGAggucauuc ccaaucuuuauccuaugg     gaauuagaguuauccu   ug c
   ||||  ||| ||||||| ||||  |||||||||||||||| ||||||||||||||||||     ||||||||||||||||   ||  
   cggu  agg auacuag acac  aguuuccuccgguaag gguuagaaauaggauacc     cuuaaucucaaugggg   ac a
aua    ug   u       u    au                a                  aacuc                gug  g 

Annotation confidence Not enough data

Genome context

chr17: 36369753-36369927 [-]

Mature gma-miR10195

• Accession: MIMAT0040962
• Description: Glycine max gma-miR10195 mature miRNA
• Sequence: 11 - UAUGAUUUUGUGGAUCAAAGGA - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25465409
   An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
   "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
   "Plant Cell (2014) 26:4584-4601