Stem-loop gma-MIR1446

Accession

MI0032968

Description

Glycine max gma-MIR1446 precursor miRNA

Literature search

1 open access papers mention gma-MIR1446
(1 sentences)

Sequence

2106 reads, 8.0 reads per million, 135 experiments

auucaacgucUUCUGAACUCUCUCCCUCAAUacucauugcuacagauagaaaauucaguuaaggucuuuuuucguaagaagcucuUGAGGGUUGAGGGUUCGAAAGACguuuaguu
....((((((((.(((((((((.(((((((..((..((((...(((.(((..............))).)))..))))..))...)))))))..))))))))).)))))))).....

Structure

-auuc        C         -U       -Ua  ca    uac   u   aaauuc 
     aacgucUU UGAACUCUC  CCCUCAA   cu  uugc   aga aga      a
     |||||||| |||||||||  |||||||   ||  ||||   ||| |||       
     uugCAGAA GCUUGGGAG  GGGAGUu   ga  aaug   uuu ucu      g
uugau        A         UU       cuc  ag    -cu   u   ggaauu 

Annotation confidence High

Genome context

Unknown

Mature gma-miR1446-5p

• Accession: MIMAT0040968
• Description: Glycine max gma-miR1446-5p mature miRNA
• Sequence: 11 - UUCUGAACUCUCUCCCUCAAU - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR1446-3p

• Accession: MIMAT0054483
• Description: Glycine max gma-miR1446-3p mature miRNA
• Sequence: 86 - UGAGGGUUGAGGGUUCGAAAGAC - 108
• Evidence: experimental ; unknown

References

1. PubMed ID: 25465409
   An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
   "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
   "Plant Cell (2014) 26:4584-4601