Stem-loop gma-MIR10201

Accession

MI0032969

Description

Glycine max gma-MIR10201 precursor miRNA

Sequence

uuuuccuugcUACCGGUAGUAAAUGGAUGCCUcgacuugugugucugcuaccccccucgcgcaauugaaguugcaaagcaucccuugacuacuguucugcuuuccccgacauacacuaccauagcuaugugucugugaaaggauuu
.............(((((((.((.((((((..(((((((((((..............)))))).....)))))....)))))).)).)))))))...(.(((((.(.((((((..(((...)))...)))))).).))))).)...

Structure

---------------------------------------uuuuccuugcUAC       A  U      --CU     -----      ucugcu 
                                                    CGGUAGU AA GGAUGC    cgacu     ugugug      a
                                                    ||||||| || ||||||    |||||     ||||||       
                                                    gucauca uu ccuacg    guuga     acgcgc      c
uuuaggaaagugucuguguaucgauaccaucacauacagccccuuucgucuu       g  c      aaac     aguua      uccccc 

Annotation confidence Not enough data

Genome context

chr6: 22396788-22396933 [-]

Mature gma-miR10201

• Accession: MIMAT0040969
• Description: Glycine max gma-miR10201 mature miRNA
• Sequence: 11 - UACCGGUAGUAAAUGGAUGCCU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25465409
   An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
   "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
   "Plant Cell (2014) 26:4584-4601