Stem-loop sfv-mir-S2

Accession

MI0032973

Description

Simian foamy virus sfv-mir-S2 precursor miRNA

Sequence

UAGGAGCCACUAGUUGAGCCUguguguucaaauccaUGCUCAGCUAAAGUGACUCCCUUU
..((((.((((((((((((.((.((......)).)).))))))))..)))).))))....

Structure

--UA    C    --        C  u  gu 
    GGAG CACU  AGUUGAGC Ug gu  u
    |||| ||||  |||||||| || ||   
    CCUC GUGA  UCGACUCG ac ua  c
UUUC    A    AA        U  c  aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature sfv-miR-S2-5p

• Accession: MIMAT0040974
• Description: Simian foamy virus sfv-miR-S2-5p mature miRNA
• Sequence: 1 - UAGGAGCCACUAGUUGAGCCU - 21
• Evidence: experimental ; Illumina [1]

Mature sfv-miR-S2-3p

• Accession: MIMAT0040975
• Description: Simian foamy virus sfv-miR-S2-3p mature miRNA
• Sequence: 37 - UGCUCAGCUAAAGUGACUCCCUUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24713319
   Noncanonical microRNA (miRNA) biogenesis gives rise to retroviral mimics of lymphoproliferative and immunosuppressive host miRNAs
   "Kincaid RP, Chen Y, Cox JE, Rethwilm A, Sullivan CS"
   "MBio (2014) 5:e00074