Stem-loop sfv-mir-S4

Accession

MI0032975

Description

Simian foamy virus sfv-mir-S4 precursor miRNA

Sequence

CAAGAGCCCGGUAAGCAUUCAAGuaguucgaaucccuUUAAUGCUGACGGAUUGCUCUUU
.(((((((((...((((((.(((............))).))))))..)))...)))))).

Structure

C      ---   GUA      C   uaguu 
 AAGAGC   CCG   AGCAUU AAG     c
 ||||||   |||   |||||| |||      
 UUCUCG   GGC   UCGUAA Uuc     g
U      UUA   -AG      U   ccuaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature sfv-miR-S4-5p

• Accession: MIMAT0040978
• Description: Simian foamy virus sfv-miR-S4-5p mature miRNA
• Sequence: 1 - CAAGAGCCCGGUAAGCAUUCAAG - 23
• Evidence: experimental ; Illumina [1]

Mature sfv-miR-S4-3p

• Accession: MIMAT0040979
• Description: Simian foamy virus sfv-miR-S4-3p mature miRNA
• Sequence: 38 - UUAAUGCUGACGGAUUGCUCUUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24713319
   Noncanonical microRNA (miRNA) biogenesis gives rise to retroviral mimics of lymphoproliferative and immunosuppressive host miRNAs
   "Kincaid RP, Chen Y, Cox JE, Rethwilm A, Sullivan CS"
   "MBio (2014) 5:e00074