Stem-loop sfv-mir-S5

Accession

MI0032976

Description

Simian foamy virus sfv-mir-S5 precursor miRNA

Sequence

AAAAAAGGGAAUGGCUAAACUUGuuacagcucgagcaaaCAUUUAGCAAUUUCCUUUGCUUU
...(((((((((.((((((.(((((........)))))...)))))).))))))))).....

Structure

--AAA         G      --C     aca 
     AAAGGGAAU GCUAAA   UUGuu   g
     ||||||||| ||||||   |||||    
     UUUCCUUUA CGAUUU   aacga   c
UUUCG         A      ACa     gcu 

Annotation confidence Not enough data

Genome context

Unknown

Mature sfv-miR-S5-5p

• Accession: MIMAT0040980
• Description: Simian foamy virus sfv-miR-S5-5p mature miRNA
• Sequence: 1 - AAAAAAGGGAAUGGCUAAACUUG - 23
• Evidence: experimental ; Illumina [1]

Mature sfv-miR-S5-3p

• Accession: MIMAT0040981
• Description: Simian foamy virus sfv-miR-S5-3p mature miRNA
• Sequence: 40 - CAUUUAGCAAUUUCCUUUGCUUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24713319
   Noncanonical microRNA (miRNA) biogenesis gives rise to retroviral mimics of lymphoproliferative and immunosuppressive host miRNAs
   "Kincaid RP, Chen Y, Cox JE, Rethwilm A, Sullivan CS"
   "MBio (2014) 5:e00074