Stem-loop vca-MIR393

Accession

MI0032992

Description

Vriesea carinata vca-MIR393 precursor miRNA

Sequence

ggagagcUCCAAAGGGAUCGCAUUGAUCucuauuucuaucauguguugggugaUCAAUGCGAUUUCUUUGGAAUuuucc
((((((.(((((((((((((((((((((((((...(......)...)))).))))))))))))))))))))).))))))

Structure

      c                     -    uuu ua 
ggagag UCCAAAGGGAUCGCAUUGAUC ucua   c  u
|||||| ||||||||||||||||||||| ||||   |   
ccuuuU AGGUUUCUUUAGCGUAACUag gggu   g  c
      A                     u    ugu ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR393-5p

• Accession: MIMAT0041011
• Description: Vriesea carinata vca-miR393-5p mature miRNA
• Sequence: 8 - UCCAAAGGGAUCGCAUUGAUC - 28
• Evidence: experimental ; Illumina [1]

Mature vca-miR393-3p

• Accession: MIMAT0041012
• Description: Vriesea carinata vca-miR393-3p mature miRNA
• Sequence: 54 - UCAAUGCGAUUUCUUUGGAAU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223