Stem-loop vca-MIR10206a

Accession

MI0033003

Description

Vriesea carinata vca-MIR10206a precursor miRNA

Sequence

aucuuuuuuuuauaAGGACAGAUCAGAUUCAUUGAAUCuaauaaaaucuagucaguaaauaauaaccagAUUCAAUGAAUCUAUCUGUCAAUaucaaaauuaggu
((((..((((.(((..(((((((.(((((((((((((((............................))))))))))))))))))))))..))).))))..))))

Structure

    uu    u   AG       C               aauaaaaucuagu 
aucu  uuuu aua  GACAGAU AGAUUCAUUGAAUCu             c
||||  |||| |||  ||||||| |||||||||||||||              
ugga  aaaa uaU  CUGUCUA UCUAAGUAACUUAga             a
    uu    c   AA       -               ccaauaauaaaug 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR10206a-5p

• Accession: MIMAT0041033
• Description: Vriesea carinata vca-miR10206a-5p mature miRNA
• Sequence: 15 - AGGACAGAUCAGAUUCAUUGAAUC - 38
• Evidence: experimental ; Illumina [1]

Mature vca-miR10206a-3p

• Accession: MIMAT0041034
• Description: Vriesea carinata vca-miR10206a-3p mature miRNA
• Sequence: 70 - AUUCAAUGAAUCUAUCUGUCAAU - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223