miRBase entry: bta-mir-10225a

Stem-loop bta-mir-10225a


Accession
MI0033054
Description
Bos taurus bta-mir-10225a precursor miRNA


Sequence

132963 reads, 162.0 reads per million, 286 experiments
GUGUGACCUGCCAGGCACCgccuugucauccccuaaggCCGAGCCUGACAGAUCACACA
((((((.(((.(((((.(.((((((........)))))).).))))).))).)))))).

Structure
-      C   C     A C      uca 
 GUGUGA CUG CAGGC C gccuug   u
 |||||| ||| ||||| | ||||||    
 CACACU GAC GUCCG G Cggaau   c
A      A   A     A C      ccc 


Annotation confidence High
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Genome context
26: 42415473-42415531 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-10225a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-10225a-5p

Accession MIMAT0051090
Description Bos taurus bta-miR-10225a-5p mature miRNA
Sequence 1 - GUGUGACCUGCCAGGCACC - 19
Evidence experimental
Illumina [1]

Mature bta-miR-10225a-3p

Accession MIMAT0041126
Description Bos taurus bta-miR-10225a-3p mature miRNA
Sequence 39 - CCGAGCCUGACAGAUCACACA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25692199
    MicroRNA profiling of the bovine alveolar macrophage response to Mycobacterium bovis infection suggests pathogen survival is enhanced by microRNA regulation of endocytosis and lysosome trafficking
    "Vegh P, Magee DA, Nalpas NC, Bryan K, McCabe MS, Browne JA, Conlon KM, Gordon SV, Bradley DG, MacHugh DE, Lynn DJ"
    "Tuberculosis (Edinb) (2015) 95:60-67