Stem-loop tcf-mir-7

Accession

MI0033192

Description

Triops cancriformis tcf-mir-7 precursor miRNA

Sequence

3209 reads, 141.0 reads per million, 6 experiments

UGGAAGACUAGUGAUUUUGUUGUUcgauauauggggaaaCAAAAAGUCACUAGUUAUCCUA
.(((.((((((((((((((((.(((........))).))))))..)))))))))).)))..

Structure

-U   A          --      G   gau 
  GGA GACUAGUGAU  UUUGUU UUc   a
  ||| ||||||||||  |||||| |||    
  CCU UUGAUCACUG  AAACaa ggg   u
AU   A          AA      a   gua 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-7-5p

• Accession: MIMAT0041346
• Description: Triops cancriformis tcf-miR-7-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGUU - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-7-3p

• Accession: MIMAT0059195
• Description: Triops cancriformis tcf-miR-7-3p mature miRNA
• Sequence: 40 - CAAAAAGUCACUAGUUAUCCUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242