Stem-loop tcf-mir-12

Accession

MI0033197

Description

Triops cancriformis tcf-mir-12 precursor miRNA

Literature search

1 open access papers mention tcf-mir-12
(2 sentences)

Sequence

498423 reads, 24906.0 reads per million, 6 experiments

UGAGUAUUACAUCAGGUACUGGUugaacuugggacacCAGUACUUCUGUAACACUCUCC
.((((.(((((..((((((((((............)))))))))).))))).))))...

Structure

--U    A     UC          ugaac 
   GAGU UUACA  AGGUACUGGU     u
   |||| |||||  ||||||||||      
   CUCA AAUGU  UUCAUGACca     u
CCU    C     -C          caggg 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-12-5p

• Accession: MIMAT0041355
• Description: Triops cancriformis tcf-miR-12-5p mature miRNA
• Sequence: 1 - UGAGUAUUACAUCAGGUACUGGU - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-12-3p

• Accession: MIMAT0059196
• Description: Triops cancriformis tcf-miR-12-3p mature miRNA
• Sequence: 38 - CAGUACUUCUGUAACACUCUCC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242