Stem-loop tcf-mir-13

Accession

MI0033198

Description

Triops cancriformis tcf-mir-13 precursor miRNA

Sequence

25166 reads, 1165.0 reads per million, 6 experiments

CGUCGGAAUGGCUGCGGUGUGuugcguugguucaUAUCACAGCCAUUCUUGAUGAG
((((((((((((((.((((((..((....)).)))))).))))))))).)))))..

Structure

--     -         C      uu  g 
  CGUCG GAAUGGCUG GGUGUG  gc u
  ||||| ||||||||| ||||||  ||  
  GUAGU CUUACCGAC CUAUac  ug u
GA     U         A      -u  g 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-13-5p

• Accession: MIMAT0059197
• Description: Triops cancriformis tcf-miR-13-5p mature miRNA
• Sequence: 1 - CGUCGGAAUGGCUGCGGUGUG - 21
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-13-3p

• Accession: MIMAT0041356
• Description: Triops cancriformis tcf-miR-13-3p mature miRNA
• Sequence: 35 - UAUCACAGCCAUUCUUGAUGAG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242