Stem-loop tcf-mir-33

Accession

MI0033200

Description

Triops cancriformis tcf-mir-33 precursor miRNA

Sequence

3290 reads, 149.0 reads per million, 6 experiments

GUGCAUUGUAGUUGCAUUGCAuggucgguuuaagaugugCAGUGUUUCUGCAGUGCAAACC
.((((((((((..((((((((..(((.......))).))))))))..))))))))))....

Structure

---G          UU        ug   gg 
    UGCAUUGUAG  GCAUUGCA  guc  u
    ||||||||||  ||||||||  |||  u
    ACGUGACGUC  UGUGACgu  uag  u
CCAA          UU        -g   aa 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-33-5p

• Accession: MIMAT0041358
• Description: Triops cancriformis tcf-miR-33-5p mature miRNA
• Sequence: 1 - GUGCAUUGUAGUUGCAUUGCA - 21
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-33-3p

• Accession: MIMAT0059199
• Description: Triops cancriformis tcf-miR-33-3p mature miRNA
• Sequence: 40 - CAGUGUUUCUGCAGUGCAAACC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242