Stem-loop tcf-mir-34

Accession

MI0033201

Description

Triops cancriformis tcf-mir-34 precursor miRNA

Sequence

60476 reads, 3769.0 reads per million, 6 experiments

UGGCAGUGUGGUUAGCUGGUUGuguggauuucaaguuuucaCAGCCACUAUCCAUACUGCGCCC
..(((((((((.(((.((((((((.(((((...))))).))))))))))).)))))))))....

Structure

--UG         U   C        u     u 
    GCAGUGUGG UAG UGGUUGug ggauu  
    ||||||||| ||| |||||||| ||||| c
    CGUCAUACC AUC ACCGACac uuuga  
CCCG         U   -        u     a 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-34-5p

• Accession: MIMAT0041359
• Description: Triops cancriformis tcf-miR-34-5p mature miRNA
• Sequence: 1 - UGGCAGUGUGGUUAGCUGGUUG - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-34-3p

• Accession: MIMAT0059200
• Description: Triops cancriformis tcf-miR-34-3p mature miRNA
• Sequence: 42 - CAGCCACUAUCCAUACUGCGCCC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242