Stem-loop tcf-mir-279f

Accession

MI0033202

Description

Triops cancriformis tcf-mir-279f precursor miRNA

Sequence

962654 reads, 45074.0 reads per million, 6 experiments

GGUGGGCAUGGCUCUGACGUCAUGgagaauugaacgcgUGACUAGAUCCAUACUCACCAG
((((((.((((.((((..((((((............)))))))))).)))).))))))..

Structure

--      C    C    AC      gagaa 
  GGUGGG AUGG UCUG  GUCAUG     u
  |||||| |||| ||||  ||||||      
  CCACUC UACC AGAU  CAGUgc     u
GA      A    U    --      gcaag 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-279f-5p

• Accession: MIMAT0059201
• Description: Triops cancriformis tcf-miR-279f-5p mature miRNA
• Sequence: 1 - GGUGGGCAUGGCUCUGACGUCAUG - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-279f-3p

• Accession: MIMAT0041360
• Description: Triops cancriformis tcf-miR-279f-3p mature miRNA
• Sequence: 39 - UGACUAGAUCCAUACUCACCAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242