Stem-loop tcf-mir-96

Accession

MI0033207

Description

Triops cancriformis tcf-mir-96 precursor miRNA

Sequence

18649 reads, 808.0 reads per million, 6 experiments

UUUGGCACUAGCACAUUUUUGUguugagacuguuaaCAAAACUGUGAUAGUGUCAAGU
((((((((((.((((.((((((.............)))))).)))).)))))))))).

Structure

-          G    U      guuga 
 UUUGGCACUA CACA UUUUGU     g
 |||||||||| |||| ||||||     a
 GAACUGUGAU GUGU AAAACa     c
U          A    C      auugu 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-96-5p

• Accession: MIMAT0041366
• Description: Triops cancriformis tcf-miR-96-5p mature miRNA
• Sequence: 1 - UUUGGCACUAGCACAUUUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-96-3p

• Accession: MIMAT0059204
• Description: Triops cancriformis tcf-miR-96-3p mature miRNA
• Sequence: 37 - CAAAACUGUGAUAGUGUCAAGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242