miRBase entry: tcf-mir-125

Stem-loop tcf-mir-125


Accession
MI0033210
Description
Triops cancriformis tcf-mir-125 precursor miRNA


Sequence

24036 reads, 1045.0 reads per million, 6 experiments
UCCCUGAGACCCUAACUUGUGAuagcaaucucACAGGCUAGCUUCUCAGGUAU
..(((((((..(((.(((((((........))))))).)))..)))))))...

Structure
-UC       CC   A       uag 
   CCUGAGA  CUA CUUGUGA   c
   |||||||  ||| |||||||    
   GGACUCU  GAU GGACAcu   a
UAU       UC   C       cua 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tcf-miR-125-5p

Accession MIMAT0041370
Description Triops cancriformis tcf-miR-125-5p mature miRNA
Sequence 1 - UCCCUGAGACCCUAACUUGUGA - 22
Evidence experimental
Illumina [1]

Mature tcf-miR-125-3p

Accession MIMAT0059206
Description Triops cancriformis tcf-miR-125-3p mature miRNA
Sequence 33 - ACAGGCUAGCUUCUCAGGUAU - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25525151
    Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
    "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
    "RNA (2015) 21:230-242