Stem-loop tcf-mir-133

Accession

MI0033211

Description

Triops cancriformis tcf-mir-133 precursor miRNA

Sequence

23870 reads, 1080.0 reads per million, 6 experiments

AGCUGGUUGAAUCCGGGCCAAAUuguuauucauagcggagcauUUGGUCCCCUUCAACCAGCUGU
(((((((((((...((((((((((((((....)))))....)))))))))..)))))))))))..

Structure

--           UCC         ----     u 
  AGCUGGUUGAA   GGGCCAAAU    uguua u
  |||||||||||   |||||||||    |||||  
  UCGACCAACUU   CCUGGUUua    gcgau c
UG           -CC         cgag     a 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-133-5p

• Accession: MIMAT0059207
• Description: Triops cancriformis tcf-miR-133-5p mature miRNA
• Sequence: 1 - AGCUGGUUGAAUCCGGGCCAAAU - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-133-3p

• Accession: MIMAT0041371
• Description: Triops cancriformis tcf-miR-133-3p mature miRNA
• Sequence: 44 - UUGGUCCCCUUCAACCAGCUGU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242