Stem-loop tcf-mir-153

Accession

MI0033213

Description

Triops cancriformis tcf-mir-153 precursor miRNA

Sequence

8787 reads, 379.0 reads per million, 6 experiments

UCAUUUUUGUGAUUUUUGCAAUUGuauuaaagauuuuaaUUGCAUAGUCACAAAAGUGAUG
((((((((((((((..((((((((............)))))))).))))))))))))))..

Structure

--              UU        uauua 
  UCAUUUUUGUGAUU  UGCAAUUG     a
  ||||||||||||||  ||||||||      
  AGUGAAAACACUGA  ACGUUaau     a
GU              -U        uuuag 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-153-5p

• Accession: MIMAT0041373
• Description: Triops cancriformis tcf-miR-153-5p mature miRNA
• Sequence: 1 - UCAUUUUUGUGAUUUUUGCAAUUG - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-153-3p

• Accession: MIMAT0041374
• Description: Triops cancriformis tcf-miR-153-3p mature miRNA
• Sequence: 40 - UUGCAUAGUCACAAAAGUGAUG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242