Stem-loop tcf-mir-190

Accession

MI0033215

Description

Triops cancriformis tcf-mir-190 precursor miRNA

Sequence

7926 reads, 351.0 reads per million, 6 experiments

AGAUAUGUUUGAUAUUCUUGGUUGuggcuuuccaacucaaCCAGAUAUCAGACAUAUUAUUA
.(((((((((((((((..(((((((((....)))...)))))))))))))))))))))....

Structure

---A               CU      ---   c 
    GAUAUGUUUGAUAUU  UGGUUG   ugg u
    |||||||||||||||  ||||||   |||  
    UUAUACAGACUAUAG  ACCaac   acc u
AUUA               --      uca   u 

Annotation confidence Medium

Genome context

Unknown

Mature tcf-miR-190-5p

• Accession: MIMAT0041377
• Description: Triops cancriformis tcf-miR-190-5p mature miRNA
• Sequence: 1 - AGAUAUGUUUGAUAUUCUUGGUUG - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-190-3p

• Accession: MIMAT0059208
• Description: Triops cancriformis tcf-miR-190-3p mature miRNA
• Sequence: 41 - CCAGAUAUCAGACAUAUUAUUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242