Stem-loop tcf-mir-219

Accession

MI0033218

Description

Triops cancriformis tcf-mir-219 precursor miRNA

Sequence

513 reads, 27.0 reads per million, 6 experiments

UGAUUGUCCAAACGCAAUUCUUGuaacauauuauucaacaAGAAGUGUGUGGGGACAUCAUU
((((.((((..(((((.(((((((.............))))))).)))))..))))))))..

Structure

--    U    AA     A       aacau 
  UGAU GUCC  ACGCA UUCUUGu     a
  |||| ||||  ||||| |||||||     u
  ACUA CAGG  UGUGU AAGAaca     u
UU    -    GG     G       acuua 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-219-5p

• Accession: MIMAT0041381
• Description: Triops cancriformis tcf-miR-219-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-219-3p

• Accession: MIMAT0059210
• Description: Triops cancriformis tcf-miR-219-3p mature miRNA
• Sequence: 41 - AGAAGUGUGUGGGGACAUCAUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242