Stem-loop tcf-mir-252b

Accession

MI0033220

Description

Triops cancriformis tcf-mir-252b precursor miRNA

Sequence

7053 reads, 315.0 reads per million, 6 experiments

CUAAGUAGUUGUGCCGCAGGUAAccgauccgagugcuuACCUGCACACGCCUGCUUACAUC
.(((((((.((((..((((((((.((.......)).)))))))).)))).)))))))....

Structure

---C       U    CC        c  au 
    UAAGUAG UGUG  GCAGGUAA cg  c
    ||||||| ||||  |||||||| ||  c
    AUUCGUC GCAC  CGUCCAuu gu  g
CUAC       C    -A        c  ga 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-252b-5p

• Accession: MIMAT0041384
• Description: Triops cancriformis tcf-miR-252b-5p mature miRNA
• Sequence: 1 - CUAAGUAGUUGUGCCGCAGGUAA - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-252b-3p

• Accession: MIMAT0059211
• Description: Triops cancriformis tcf-miR-252b-3p mature miRNA
• Sequence: 39 - ACCUGCACACGCCUGCUUACAUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242