Stem-loop tcf-mir-263a

Accession

MI0033221

Description

Triops cancriformis tcf-mir-263a precursor miRNA

Sequence

203412 reads, 9122.0 reads per million, 6 experiments

AAUGGCACUGGAAGAAUUCACGGGaagaggcacauugagacggccccCGUGGCUCUCCAGUGCUGUACC
.(((((((((((.((..(((((((....(((.(........))))))))))).)))))))))))))...

Structure

--A           A  AU       aaga   a auu 
   AUGGCACUGGA GA  UCACGGG    ggc c   g
   ||||||||||| ||  |||||||    ||| |    
   UGUCGUGACCU CU  GGUGCcc    ccg g   a
CCA           -  -C       ----   - cag 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-263a-5p

• Accession: MIMAT0041385
• Description: Triops cancriformis tcf-miR-263a-5p mature miRNA
• Sequence: 1 - AAUGGCACUGGAAGAAUUCACGGG - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-263a-3p

• Accession: MIMAT0059212
• Description: Triops cancriformis tcf-miR-263a-3p mature miRNA
• Sequence: 48 - CGUGGCUCUCCAGUGCUGUACC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242