Stem-loop tcf-mir-263b

Accession

MI0033222

Description

Triops cancriformis tcf-mir-263b precursor miRNA

Sequence

28854 reads, 1263.0 reads per million, 6 experiments

CUUGGCACUGGAAGAAUUCACAGAguauuugaaaccaucGUGGAUUCCCUGGUGCCAUAGA
..(((((((((..((((((((.((.............)))))))))).)))))))))....

Structure

--CU         AA        A  guauu 
    UGGCACUGG  GAAUUCAC GA     u
    |||||||||  |||||||| ||     g
    ACCGUGGUC  CUUAGGUG cu     a
AGAU         -C        -  accaa 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-263b-5p

• Accession: MIMAT0041386
• Description: Triops cancriformis tcf-miR-263b-5p mature miRNA
• Sequence: 1 - CUUGGCACUGGAAGAAUUCACAGA - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-263b-3p

• Accession: MIMAT0059213
• Description: Triops cancriformis tcf-miR-263b-3p mature miRNA
• Sequence: 40 - GUGGAUUCCCUGGUGCCAUAGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242