Stem-loop tcf-mir-275

Accession

MI0033223

Description

Triops cancriformis tcf-mir-275 precursor miRNA

Sequence

332948 reads, 18323.0 reads per million, 6 experiments

CUGUGCUACGGCAGGUGCUUGCGUCugagucagaucagUCAGGUACCUGAAGUAGCGCGC
.((((((((..((((((((((...((((......)))).))))))))))..)))))))).

Structure

C        GG          CGU    gu 
 UGUGCUAC  CAGGUGCUUG   Cuga  c
 ||||||||  ||||||||||   ||||   
 GCGCGAUG  GUCCAUGGAC   gacu  a
C        AA          --U    ag 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-275-5p

• Accession: MIMAT0059214
• Description: Triops cancriformis tcf-miR-275-5p mature miRNA
• Sequence: 1 - CUGUGCUACGGCAGGUGCUUGCGUC - 25
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-275-3p

• Accession: MIMAT0041387
• Description: Triops cancriformis tcf-miR-275-3p mature miRNA
• Sequence: 39 - UCAGGUACCUGAAGUAGCGCGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242