Stem-loop tcf-mir-277

Accession

MI0033225

Description

Triops cancriformis tcf-mir-277 precursor miRNA

Sequence

7133 reads, 344.0 reads per million, 6 experiments

CGUACCAGGAAUGUGUUUACAuuauguuucguaaaagaugUAAAUGCAUUUUCUGGUAUGUC
(((((((((((((((((((((((.............)))))))))))).)))))))))))..

Structure

--           -            auguu 
  CGUACCAGGAA UGUGUUUACAuu     u
  ||||||||||| ||||||||||||     c
  GUAUGGUCUUU ACGUAAAUguag     g
CU           U            aaaau 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-277-5p

• Accession: MIMAT0059215
• Description: Triops cancriformis tcf-miR-277-5p mature miRNA
• Sequence: 1 - CGUACCAGGAAUGUGUUUACA - 21
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-277-3p

• Accession: MIMAT0041390
• Description: Triops cancriformis tcf-miR-277-3p mature miRNA
• Sequence: 41 - UAAAUGCAUUUUCUGGUAUGUC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242