Stem-loop tcf-mir-279a

Accession

MI0033227

Description

Triops cancriformis tcf-mir-279a precursor miRNA

Sequence

905057 reads, 43411.0 reads per million, 6 experiments

GGUGAAUGUGUAUCUGGUGCAUGuguaucaauuuccaUGACUAGAUCCACACUCAUCCA
(((((.((((.(((((((.((((.(.........)))))))))))).)))).)))))..

Structure

--     A    U       G    u uau 
  GGUGA UGUG AUCUGGU CAUG g   c
  ||||| |||| ||||||| |||| |   a
  CUACU ACAC UAGAUCA GUac c   a
AC     C    C       -    - uuu 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-279a-5p

• Accession: MIMAT0059217
• Description: Triops cancriformis tcf-miR-279a-5p mature miRNA
• Sequence: 1 - GGUGAAUGUGUAUCUGGUGCAUG - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-279a-3p

• Accession: MIMAT0041392
• Description: Triops cancriformis tcf-miR-279a-3p mature miRNA
• Sequence: 38 - UGACUAGAUCCACACUCAUCCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242