Stem-loop tcf-mir-279b

Accession

MI0033228

Description

Triops cancriformis tcf-mir-279b precursor miRNA

Sequence

818060 reads, 36947.0 reads per million, 6 experiments

GGUGGGUAUGUUUCUAGUGCAUGcaugagguuguuuauaagaaccaUGACUAGAUCCAUACUCAUCU
((((((((((..((((((.(((......((((.((...)).)))))))))))))..)))))))))).

Structure

-          UU      G   Gcauga    g  u 
 GGUGGGUAUG  UCUAGU CAU      gguu uu  
 ||||||||||  |||||| |||      |||| || a
 CUACUCAUAC  AGAUCA GUa      ccaa aa  
U          CU      -   ------    g  u 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-279b-5p

• Accession: MIMAT0059218
• Description: Triops cancriformis tcf-miR-279b-5p mature miRNA
• Sequence: 1 - GGUGGGUAUGUUUCUAGUGCAUG - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-279b-3p

• Accession: MIMAT0041393
• Description: Triops cancriformis tcf-miR-279b-3p mature miRNA
• Sequence: 47 - UGACUAGAUCCAUACUCAUCU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242