Stem-loop tcf-mir-279c

Accession

MI0033229

Description

Triops cancriformis tcf-mir-279c precursor miRNA

Sequence

16304 reads, 1022.0 reads per million, 6 experiments

GGCGAGUGGGCAUCUGGUACAUGuguuuucacuaaguuggucaUGACUAGAUCCCACACUCGUCCGG
((((((((((.(((((((.((((..................))))))))))).)).))))))))...

Structure

---        -  C       A    uguuuuca 
   GGCGAGUG GG AUCUGGU CAUG        c
   |||||||| || ||||||| ||||         
   CUGCUCAC CC UAGAUCA GUac        u
GGC        A  C       -    ugguugaa 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-279c-5p

• Accession: MIMAT0059219
• Description: Triops cancriformis tcf-miR-279c-5p mature miRNA
• Sequence: 1 - GGCGAGUGGGCAUCUGGUACAUG - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-279c-3p

• Accession: MIMAT0041394
• Description: Triops cancriformis tcf-miR-279c-3p mature miRNA
• Sequence: 44 - UGACUAGAUCCCACACUCGUCCGG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242