Stem-loop tcf-mir-279d

Accession

MI0033230

Description

Triops cancriformis tcf-mir-279d precursor miRNA

Sequence

4416 reads, 209.0 reads per million, 6 experiments

GAUGAGUGCGUUUCUGGUGCAUAguacuguaacauaUGACUAGAUUCACACUCAUCCA
((((((((.(..((((((.((((((......)).))))))))))..).))))))))..

Structure

--        C UU      G    -  ac 
  GAUGAGUG G  UCUGGU CAUA gu  u
  |||||||| |  |||||| |||| ||   
  CUACUCAC C  AGAUCA GUau ca  g
AC        A UU      -    a  au 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-279d-5p

• Accession: MIMAT0059220
• Description: Triops cancriformis tcf-miR-279d-5p mature miRNA
• Sequence: 1 - GAUGAGUGCGUUUCUGGUGCAUA - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-279d-3p

• Accession: MIMAT0041395
• Description: Triops cancriformis tcf-miR-279d-3p mature miRNA
• Sequence: 37 - UGACUAGAUUCACACUCAUCCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242