Stem-loop tcf-mir-283

Accession

MI0033234

Description

Triops cancriformis tcf-mir-283 precursor miRNA

Literature search

1 open access papers mention tcf-mir-283
(1 sentences)

Sequence

71169 reads, 3227.0 reads per million, 6 experiments

AAAUAUCAGCAGGUAAUUCUGGGCuguucccauccCAGACUACCCGUUGAUAUGCAA
..((((((((.((((..((((((.((....)).)))))).)))).))))))))....

Structure

--AA        A    AU      C  u 
    AUAUCAGC GGUA  UCUGGG ug u
    |||||||| ||||  |||||| ||  
    UAUAGUUG CCAU  AGACcc ac c
AACG        C    -C      u  c 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-283-5p

• Accession: MIMAT0041400
• Description: Triops cancriformis tcf-miR-283-5p mature miRNA
• Sequence: 1 - AAAUAUCAGCAGGUAAUUCUGGGC - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-283-3p

• Accession: MIMAT0059222
• Description: Triops cancriformis tcf-miR-283-3p mature miRNA
• Sequence: 36 - CAGACUACCCGUUGAUAUGCAA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242