Stem-loop tcf-mir-285

Accession

MI0033235

Description

Triops cancriformis tcf-mir-285 precursor miRNA

Sequence

2846 reads, 125.0 reads per million, 6 experiments

ACUGAAUUCUUUUGAUGCGUAGAuugacuccguuuaguauucUAGCACCAUUGGAAUUCAGUUUA
((((((((((..((.(((.((((...(((......)))..))))))).))..))))))))))...

Structure

---          UU  A   G    uug   cc 
   ACUGAAUUCU  UG UGC UAGA   acu  g
   ||||||||||  || ||| ||||   |||   
   UGACUUAAGG  AC ACG AUcu   uga  u
AUU          UU  C   -    -ua   uu 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-285-5p

• Accession: MIMAT0059223
• Description: Triops cancriformis tcf-miR-285-5p mature miRNA
• Sequence: 1 - ACUGAAUUCUUUUGAUGCGUAGA - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-285-3p

• Accession: MIMAT0041401
• Description: Triops cancriformis tcf-miR-285-3p mature miRNA
• Sequence: 43 - UAGCACCAUUGGAAUUCAGUUUA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242