Stem-loop tcf-mir-305

Accession

MI0033236

Description

Triops cancriformis tcf-mir-305 precursor miRNA

Sequence

17251 reads, 875.0 reads per million, 6 experiments

AUUGUACUUCAUCAGGUGCUCUGGuacagcuucaccCGGCACCUGUUGGAGUGCAAUUU
(((((((((((.((((((((..(((........))).)))))))).)))))))))))..

Structure

--           U        CU   aca 
  AUUGUACUUCA CAGGUGCU  GGu   g
  ||||||||||| ||||||||  |||    
  UAACGUGAGGU GUCCACGG  cca   c
UU           U        -C   cuu 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-305-5p

• Accession: MIMAT0041402
• Description: Triops cancriformis tcf-miR-305-5p mature miRNA
• Sequence: 1 - AUUGUACUUCAUCAGGUGCUCUGG - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-305-3p

• Accession: MIMAT0059224
• Description: Triops cancriformis tcf-miR-305-3p mature miRNA
• Sequence: 37 - CGGCACCUGUUGGAGUGCAAUUU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242