Stem-loop tcf-mir-375

Accession

MI0033240

Description

Triops cancriformis tcf-mir-375 precursor miRNA

Sequence

83132 reads, 3866.0 reads per million, 6 experiments

ACUCGAGCCCUUCGUAGCACAUCccauauacguuggaauugaUUUGUUCGUUCGGCUCGAGUUA
(((((((((...((.((((.((((((.......)))....))).))))))...)))))))))..

Structure

--         CUU  U    C   ----   ua 
  ACUCGAGCC   CG AGCA AUC    cca  u
  |||||||||   || |||| |||    |||  a
  UGAGCUCGG   GC UUGU Uag    ggu  c
AU         CUU  -    U   uuaa   ug 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-375-5p

• Accession: MIMAT0059227
• Description: Triops cancriformis tcf-miR-375-5p mature miRNA
• Sequence: 1 - ACUCGAGCCCUUCGUAGCACAUC - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-375-3p

• Accession: MIMAT0041407
• Description: Triops cancriformis tcf-miR-375-3p mature miRNA
• Sequence: 43 - UUUGUUCGUUCGGCUCGAGUUA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242